3D structure

PDB id
6YAM (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mammalian 48S late-stage translation initiation complex (LS48S+eIF3 IC) with beta-globin mRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
CCUUUGUG
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6YAM|1|2|C|194
6YAM|1|2|C|195
6YAM|1|2|U|196
6YAM|1|2|U|197
6YAM|1|2|U|198
6YAM|1|2|G|199
6YAM|1|2|U|200
6YAM|1|2|G|201

Current chains

Chain 2
18S ribosomal RNA

Nearby chains

Chain K
40S ribosomal protein eS8

Coloring options:

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