HL_6YAM_010

3D structure

PDB id

6YAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 48S late-stage translation initiation complex (LS48S+eIF3 IC) with beta-globin mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCUCCGUG

Length

8 nucleotides

Bulged bases

6YAM|1|2|U|314

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YAM|1|2|C|312
6YAM|1|2|C|313
6YAM|1|2|U|314
6YAM|1|2|C|315
6YAM|1|2|C|316
6YAM|1|2|G|317
6YAM|1|2|U|318
6YAM|1|2|G|319

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain I

40S ribosomal protein eS6