HL_6YDW_064

3D structure

PDB id

6YDW (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtEFG1 and two tRNAMet (TI-POST)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6YDW_064 not in the Motif Atlas

Geometric match to HL_4Y1M_004

Geometric discrepancy: 0.1717

The information below is about HL_4Y1M_004

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

6YDW|1|BA|C|1461
6YDW|1|BA|G|1462
6YDW|1|BA|A|1463
6YDW|1|BA|A|1464
6YDW|1|BA|A|1465
6YDW|1|BA|G|1466

Current chains

Chain BA

12S rRNA

Nearby chains

Chain BC

Elongation factor G, mitochondrial