HL_6YEF_026
3D structure
- PDB id
- 6YEF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S initiation complex with assigned rRNA modifications from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGGCCCCUCGGGUAC
- Length
- 15 nucleotides
- Bulged bases
- 6YEF|1|A|C|935
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6YEF|1|A|G|925
6YEF|1|A|G|926
6YEF|1|A|G|927
6YEF|1|A|C|928
6YEF|1|A|C|929
6YEF|1|A|C|930
6YEF|1|A|C|931
6YEF|1|A|U|932
6YEF|1|A|C|935
6YEF|1|A|G|936
6YEF|1|A|G|937
6YEF|1|A|G|938
6YEF|1|A|U|939
6YEF|1|A|A|941
6YEF|1|A|C|942
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain m
- 30S ribosomal protein S13
Coloring options: