HL_6YHS_058
3D structure
- PDB id
- 6YHS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Acinetobacter baumannii ribosome-amikacin complex - 50S subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- AGUUCAUAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6YHS_058 not in the Motif Atlas
- Homologous match to HL_7RQB_060
- Geometric discrepancy: 0.1303
- The information below is about HL_7RQB_060
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06192.2
- Basepair signature
- cWW-tSH-F-F
- Number of instances in this motif group
- 14
Unit IDs
6YHS|1|1|A|2460
6YHS|1|1|G|2461
6YHS|1|1|U|2462
6YHS|1|1|U|2463
6YHS|1|1|C|2464
6YHS|1|1|A|2465
6YHS|1|1|U|2466
6YHS|1|1|A|2467
6YHS|1|1|U|2468
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L6
- Chain b
- 50S ribosomal protein L36
Coloring options: