HL_6YLB_003
3D structure
- PDB id
- 6YLB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the SAM-SAH riboswitch with SAM
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.12 Å
Loop
- Sequence
- CGGCUUCCUG
- Length
- 10 nucleotides
- Bulged bases
- 6YLB|1|F|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6YLB_003 not in the Motif Atlas
- Geometric match to HL_6YL5_005
- Geometric discrepancy: 0.0412
- The information below is about HL_6YL5_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_35677.5
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
6YLB|1|F|C|15
6YLB|1|F|G|16
6YLB|1|F|G|17
6YLB|1|F|C|18
6YLB|1|F|U|19
6YLB|1|F|U|20
6YLB|1|F|C|21
6YLB|1|F|C|22
6YLB|1|F|U|23
6YLB|1|F|G|24
Current chains
- Chain F
- Chains: A,C,F,I,M,O
Nearby chains
- Chain G
- Chains: B,D,G,J,N,P
- Chain P
- Chains: B,D,G,J,N,P
Coloring options: