HL_6YLG_051

3D structure

PDB id

6YLG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGAGCUUCGGCGCCAGUGAAAUAC

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YLG|1|1|G|2466
6YLG|1|1|G|2467
6YLG|1|1|A|2468
6YLG|1|1|G|2469
6YLG|1|1|C|2470
6YLG|1|1|U|2471
6YLG|1|1|U|2472
6YLG|1|1|C|2473
6YLG|1|1|G|2474
6YLG|1|1|G|2475
6YLG|1|1|C|2476
6YLG|1|1|G|2477
6YLG|1|1|C|2478
6YLG|1|1|C|2479
6YLG|1|1|A|2480
6YLG|1|1|G|2481
6YLG|1|1|U|2482
6YLG|1|1|G|2483
6YLG|1|1|A|2484
6YLG|1|1|A|2485
6YLG|1|1|A|2486
6YLG|1|1|U|2487
6YLG|1|1|A|2488
6YLG|1|1|C|2489

Current chains

Chain 1

25S rRNA

Nearby chains

Chain o

60S ribosomal protein L1-A

Chain t

Protein SDA1