HL_6YLH_023

3D structure

PDB id

6YLH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rix1-Rea1 pre-60S particle - full composite structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGAAAUG

Length

7 nucleotides

Bulged bases

6YLH|1|1|A|1025, 6YLH|1|1|A|1026, 6YLH|1|1|U|1028

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YLH|1|1|C|1023
6YLH|1|1|G|1024
6YLH|1|1|A|1025
6YLH|1|1|A|1026
6YLH|1|1|A|1027
6YLH|1|1|U|1028
6YLH|1|1|G|1029

Current chains

Chain 1

25S rRNA

Nearby chains

Chain 0

Pre-rRNA-processing protein IPI3

Chain t

Protein SDA1

Chain v

Midasin