HL_6YLX_023
3D structure
- PDB id
- 6YLX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- pre-60S State NE1 (TAP-Flag-Nop53)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- AUGAGGUAAAGCGAAAACUUUAAAUAUGU
- Length
- 29 nucleotides
- Bulged bases
- 6YLX|1|1|A|997, 6YLX|1|1|A|1003
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6YLX|1|1|A|989
6YLX|1|1|U|990
6YLX|1|1|G|991
6YLX|1|1|A|992
6YLX|1|1|G|993
6YLX|1|1|G|994
6YLX|1|1|U|995
6YLX|1|1|A|996
6YLX|1|1|A|997
6YLX|1|1|A|998
6YLX|1|1|G|999
6YLX|1|1|C|1000
6YLX|1|1|G|1001
6YLX|1|1|A|1002
6YLX|1|1|A|1003
6YLX|1|1|A|1047
6YLX|1|1|A|1048
6YLX|1|1|C|1049
6YLX|1|1|U|1050
6YLX|1|1|U|1051
6YLX|1|1|U|1052
6YLX|1|1|A|1053
6YLX|1|1|A|1054
6YLX|1|1|A|1055
6YLX|1|1|U|1056
6YLX|1|1|A|1057
6YLX|1|1|U|1058
6YLX|1|1|G|1059
6YLX|1|1|U|1060
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain F
- 60S ribosomal protein L7-A
- Chain S
- 60S ribosomal protein L20-A
- Chain T
- 60S ribosomal protein L21-A
Coloring options: