HL_6YLX_044

3D structure

PDB id

6YLX (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-60S State NE1 (TAP-Flag-Nop53)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GGUCGGACGAUC

Length

12 nucleotides

Bulged bases

6YLX|1|1|G|1952

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YLX|1|1|G|1948
6YLX|1|1|G|1949
6YLX|1|1|U|1950
6YLX|1|1|C|1951
6YLX|1|1|G|1952
6YLX|1|1|G|1953
6YLX|1|1|A|2093
6YLX|1|1|C|2094
6YLX|1|1|G|2095
6YLX|1|1|A|2096
6YLX|1|1|U|2097
6YLX|1|1|C|2098

Current chains

Chain 1

25S rRNA

Nearby chains

Chain R

60S ribosomal protein L19-A