HL_6YS3_027

3D structure

PDB id

6YS3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

GGGGGUCAUCCCGACUUACC

Length

20 nucleotides

Bulged bases

6YS3|1|b|C|890, 6YS3|1|b|A|898

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YS3|1|b|G|881
6YS3|1|b|G|882
6YS3|1|b|G|883
6YS3|1|b|G|884
6YS3|1|b|G|885
6YS3|1|b|U|886
6YS3|1|b|C|887
6YS3|1|b|A|888
6YS3|1|b|U|889
6YS3|1|b|C|890
6YS3|1|b|C|891
6YS3|1|b|C|892
6YS3|1|b|G|893
6YS3|1|b|A|894
6YS3|1|b|C|895
6YS3|1|b|U|896
6YS3|1|b|U|897
6YS3|1|b|A|898
6YS3|1|b|C|899
6YS3|1|b|C|900

Current chains

Chain b

23S rRNA

Nearby chains