HL_6YSI_057
3D structure
- PDB id
- 6YSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Acinetobacter baumannii ribosome-tigecycline complex - 50S subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- AGUUCAUAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6YSI_057 not in the Motif Atlas
- Homologous match to HL_5J7L_193
- Geometric discrepancy: 0.1389
- The information below is about HL_5J7L_193
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_32735.2
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
6YSI|1|1|A|2460
6YSI|1|1|G|2461
6YSI|1|1|U|2462
6YSI|1|1|U|2463
6YSI|1|1|C|2464
6YSI|1|1|A|2465
6YSI|1|1|U|2466
6YSI|1|1|A|2467
6YSI|1|1|U|2468
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L6
- Chain I
- 50S ribosomal protein L16
- Chain b
- 50S ribosomal protein L36
Coloring options: