HL_6YSR_027
3D structure
- PDB id
- 6YSR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the P+9 stalled ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGCUUAGAAGCAGCC
- Length
- 15 nucleotides
- Bulged bases
- 6YSR|1|A|U|1066, 6YSR|1|A|A|1070, 6YSR|1|A|G|1071, 6YSR|1|A|C|1072
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6YSR_027 not in the Motif Atlas
- Geometric match to HL_4WF9_037
- Geometric discrepancy: 0.3549
- The information below is about HL_4WF9_037
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_48778.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 46
Unit IDs
6YSR|1|A|G|1062
6YSR|1|A|G|1063
6YSR|1|A|C|1064
6YSR|1|A|U|1065
6YSR|1|A|U|1066
6YSR|1|A|A|1067
6YSR|1|A|G|1068
6YSR|1|A|A|1069
6YSR|1|A|A|1070
6YSR|1|A|G|1071
6YSR|1|A|C|1072
6YSR|1|A|A|1073
6YSR|1|A|G|1074
6YSR|1|A|C|1075
6YSR|1|A|C|1076
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain I
- 50S ribosomal protein L11
Coloring options: