HL_6YST_063
3D structure
- PDB id
- 6YST (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGCCAA
- Length
- 6 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6YST_063 not in the Motif Atlas
- Homologous match to HL_5J7L_198
- Geometric discrepancy: 0.1192
- The information below is about HL_5J7L_198
- Detailed Annotation
- Ribsomal LSU H95
- Broad Annotation
- Ribsomal LSU H95
- Motif group
- HL_46680.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 30
Unit IDs
6YST|1|A|U|2701
6YST|1|A|G|2702
6YST|1|A|C|2703
6YST|1|A|C|2704
6YST|1|A|A|2705
6YST|1|A|A|2706
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain N
- 50S ribosomal protein L17
Coloring options: