HL_6YST_094

3D structure

PDB id

6YST (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CAGCGGUCCGGCCGG

Length

15 nucleotides

Bulged bases

6YST|1|a|C|1136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YST|1|a|C|1129
6YST|1|a|A|1130
6YST|1|a|G|1131
6YST|1|a|C|1132
6YST|1|a|G|1133
6YST|1|a|G|1134
6YST|1|a|U|1135
6YST|1|a|C|1136
6YST|1|a|C|1137
6YST|1|a|G|1138
6YST|1|a|G|1139
6YST|1|a|C|1140
6YST|1|a|C|1141
6YST|1|a|G|1142
6YST|1|a|G|1143

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S9

Chain j

30S ribosomal protein S10