HL_6YST_105

3D structure

PDB id

6YST (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUGGACGCCAGUCUGC

Length

16 nucleotides

Bulged bases

6YST|1|A|C|2145, 6YST|1|A|C|2150, 6YST|1|A|U|2151

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YST|1|A|G|2138
6YST|1|A|U|2139
6YST|1|A|G|2140
6YST|1|A|G|2141
6YST|1|A|A|2142
6YST|1|A|C|2143
6YST|1|A|G|2144
6YST|1|A|C|2145
6YST|1|A|C|2146
6YST|1|A|A|2147
6YST|1|A|G|2148
6YST|1|A|U|2149
6YST|1|A|C|2150
6YST|1|A|U|2151
6YST|1|A|G|2152
6YST|1|A|C|2153

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain k

30S ribosomal protein S11