HL_6YSU_021

3D structure

PDB id

6YSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AAU(1MG)(PSU)(5MC)GAAAAAUU

Length

14 nucleotides

Bulged bases

6YSU|1|A|A|751, 6YSU|1|A|A|752

QA status

Modified nucleotides: 1MG, PSU, 5MC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YSU|1|A|A|742
6YSU|1|A|A|743
6YSU|1|A|U|744
6YSU|1|A|1MG|745
6YSU|1|A|PSU|746
6YSU|1|A|5MC|747
6YSU|1|A|G|748
6YSU|1|A|A|749
6YSU|1|A|A|750
6YSU|1|A|A|751
6YSU|1|A|A|752
6YSU|1|A|A|753
6YSU|1|A|U|754
6YSU|1|A|U|755

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain 2

50S ribosomal protein L34

Chain D

50S ribosomal protein L3

Chain S

50S ribosomal protein L22

Chain v

Api137