HL_6YSU_071
3D structure
- PDB id
- 6YSU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UUUGAUCAUGG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6YSU_071 not in the Motif Atlas
- Homologous match to HL_5J7L_001
- Geometric discrepancy: 0.1625
- The information below is about HL_5J7L_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89881.5
- Basepair signature
- cWW-tHW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6YSU|1|a|U|12
6YSU|1|a|U|13
6YSU|1|a|U|14
6YSU|1|a|G|15
6YSU|1|a|A|16
6YSU|1|a|U|17
6YSU|1|a|C|18
6YSU|1|a|A|19
6YSU|1|a|U|20
6YSU|1|a|G|21
6YSU|1|a|G|22
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain e
- 30S ribosomal protein S5
- Chain l
- 30S ribosomal protein S12
- Chain y
- Alternative stalled-ribosome rescue factor B
Coloring options: