HL_6YSU_107

3D structure

PDB id

6YSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCUUUGAAGUGUGGACGCCAGUCUGCAUGGAGC

Length

33 nucleotides

Bulged bases

6YSU|1|A|U|2132, 6YSU|1|A|A|2134, 6YSU|1|A|A|2135, 6YSU|1|A|C|2143, 6YSU|1|A|C|2145, 6YSU|1|A|C|2146, 6YSU|1|A|G|2152, 6YSU|1|A|U|2155

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YSU|1|A|G|2128
6YSU|1|A|C|2129
6YSU|1|A|U|2130
6YSU|1|A|U|2131
6YSU|1|A|U|2132
6YSU|1|A|G|2133
6YSU|1|A|A|2134
6YSU|1|A|A|2135
6YSU|1|A|G|2136
6YSU|1|A|U|2137
6YSU|1|A|G|2138
6YSU|1|A|U|2139
6YSU|1|A|G|2140
6YSU|1|A|G|2141
6YSU|1|A|A|2142
6YSU|1|A|C|2143
6YSU|1|A|G|2144
6YSU|1|A|C|2145
6YSU|1|A|C|2146
6YSU|1|A|A|2147
6YSU|1|A|G|2148
6YSU|1|A|U|2149
6YSU|1|A|C|2150
6YSU|1|A|U|2151
6YSU|1|A|G|2152
6YSU|1|A|C|2153
6YSU|1|A|A|2154
6YSU|1|A|U|2155
6YSU|1|A|G|2156
6YSU|1|A|G|2157
6YSU|1|A|A|2158
6YSU|1|A|G|2159
6YSU|1|A|C|2160

Current chains

Chain A

23S ribosomal RNA

Nearby chains