HL_6Z1P_002
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UAACAUAUUGAUACGUUUAUGUA
- Length
- 23 nucleotides
- Bulged bases
- 6Z1P|1|Aa|A|95, 6Z1P|1|Aa|U|98, 6Z1P|1|Aa|A|101, 6Z1P|1|Aa|U|102, 6Z1P|1|Aa|G|103, 6Z1P|1|Aa|U|104
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Z1P|1|Aa|U|83
6Z1P|1|Aa|A|84
6Z1P|1|Aa|A|85
6Z1P|1|Aa|C|86
6Z1P|1|Aa|A|87
6Z1P|1|Aa|U|88
6Z1P|1|Aa|A|89
6Z1P|1|Aa|U|90
6Z1P|1|Aa|U|91
6Z1P|1|Aa|G|92
6Z1P|1|Aa|A|93
6Z1P|1|Aa|U|94
6Z1P|1|Aa|A|95
6Z1P|1|Aa|C|96
6Z1P|1|Aa|G|97
6Z1P|1|Aa|U|98
6Z1P|1|Aa|U|99
6Z1P|1|Aa|U|100
6Z1P|1|Aa|A|101
6Z1P|1|Aa|U|102
6Z1P|1|Aa|G|103
6Z1P|1|Aa|U|104
6Z1P|1|Aa|A|105
Current chains
- Chain Aa
- LSU rRNA_1
Nearby chains
- Chain AC
- 39-S ribosomal protein L47
- Chain AI
- Ribosomal protein L27
- Chain AP
- mL101
- Chain AT
- Signal peptide-binding domain protein
- Chain Ab
- Large subunit ribosomal RNA; LSU rRNA
- Chain Ay
- 50S ribosomal protein L24
Coloring options: