HL_6Z1P_021

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AUUUGU

Length

6 nucleotides

Bulged bases

6Z1P|1|Ab|U|761, 6Z1P|1|Ab|G|763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6Z1P_021 not in the Motif Atlas

Geometric match to HL_5TBW_068

Geometric discrepancy: 0.3787

The information below is about HL_5TBW_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_43793.1

Basepair signature

cWW-F

Number of instances in this motif group

50

Unit IDs

6Z1P|1|Ab|A|759
6Z1P|1|Ab|U|760
6Z1P|1|Ab|U|761
6Z1P|1|Ab|U|762
6Z1P|1|Ab|G|763
6Z1P|1|Ab|U|764

Current chains

Chain Ab

LSU rRNA_2

Nearby chains

Chain AS

mL104

Chain Am

Ymf74

Chain Az

bL25m