HL_6Z1P_023

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAAACAGC

Length

8 nucleotides

Bulged bases

6Z1P|1|Ab|A|848

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6Z1P_023 not in the Motif Atlas

Homologous match to HL_5J7L_160

Geometric discrepancy: 0.195

The information below is about HL_5J7L_160

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_42998.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6Z1P|1|Ab|G|846
6Z1P|1|Ab|A|847
6Z1P|1|Ab|A|848
6Z1P|1|Ab|A|849
6Z1P|1|Ab|C|850
6Z1P|1|Ab|A|851
6Z1P|1|Ab|G|852
6Z1P|1|Ab|C|853

Current chains

Chain Ab

LSU rRNA_2

Nearby chains

Chain AQ

mL102

Chain Au

50S ribosomal protein L20

Chain Av

50S ribosomal protein L21