HL_6Z1P_038

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGCAAAAUUUAAAUAUGAUGUAUA

Length

24 nucleotides

Bulged bases

6Z1P|1|Ab|A|1528, 6Z1P|1|Ab|U|1543, 6Z1P|1|Ab|U|1547

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z1P|1|Ab|U|1525
6Z1P|1|Ab|G|1526
6Z1P|1|Ab|C|1527
6Z1P|1|Ab|A|1528
6Z1P|1|Ab|A|1529
6Z1P|1|Ab|A|1530
6Z1P|1|Ab|A|1531
6Z1P|1|Ab|U|1532
6Z1P|1|Ab|U|1533
6Z1P|1|Ab|U|1534
6Z1P|1|Ab|A|1535
6Z1P|1|Ab|A|1536
6Z1P|1|Ab|A|1537
6Z1P|1|Ab|U|1538
6Z1P|1|Ab|A|1539
6Z1P|1|Ab|U|1540
6Z1P|1|Ab|G|1541
6Z1P|1|Ab|A|1542
6Z1P|1|Ab|U|1543
6Z1P|1|Ab|G|1544
6Z1P|1|Ab|U|1545
6Z1P|1|Ab|A|1546
6Z1P|1|Ab|U|1547
6Z1P|1|Ab|A|1548

Current chains

Chain Ab

LSU rRNA_2

Nearby chains

Chain AB

Ribosomal protein L28

Chain Ac

Ribosomal protein L2