HL_6Z1P_060

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUAAGAGUCAUUAUAACUAAUAAAUA

Length

26 nucleotides

Bulged bases

6Z1P|1|Ab|G|2527, 6Z1P|1|Ab|U|2536, 6Z1P|1|Ab|A|2538

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z1P|1|Ab|U|2523
6Z1P|1|Ab|U|2524
6Z1P|1|Ab|A|2525
6Z1P|1|Ab|A|2526
6Z1P|1|Ab|G|2527
6Z1P|1|Ab|A|2528
6Z1P|1|Ab|G|2529
6Z1P|1|Ab|U|2530
6Z1P|1|Ab|C|2531
6Z1P|1|Ab|A|2532
6Z1P|1|Ab|U|2533
6Z1P|1|Ab|U|2534
6Z1P|1|Ab|A|2535
6Z1P|1|Ab|U|2536
6Z1P|1|Ab|A|2537
6Z1P|1|Ab|A|2538
6Z1P|1|Ab|C|2539
6Z1P|1|Ab|U|2540
6Z1P|1|Ab|A|2541
6Z1P|1|Ab|A|2542
6Z1P|1|Ab|U|2543
6Z1P|1|Ab|A|2544
6Z1P|1|Ab|A|2545
6Z1P|1|Ab|A|2546
6Z1P|1|Ab|U|2547
6Z1P|1|Ab|A|2548

Current chains

Chain Ab

LSU rRNA_2

Nearby chains

Chain As

50S ribosomal protein L17

Chain At

bL19m

Chain Bb

Small subunit ribosomal RNA; SSU rRNA