HL_6Z1P_064
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UUAAAACAGUA
- Length
- 11 nucleotides
- Bulged bases
- 6Z1P|1|Ba|U|188, 6Z1P|1|Ba|A|189
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6Z1P_064 not in the Motif Atlas
- Geometric match to HL_3IGI_005
- Geometric discrepancy: 0.2949
- The information below is about HL_3IGI_005
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_52651.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 29
Unit IDs
6Z1P|1|Ba|U|187
6Z1P|1|Ba|U|188
6Z1P|1|Ba|A|189
6Z1P|1|Ba|A|190
6Z1P|1|Ba|A|191
6Z1P|1|Ba|A|192
6Z1P|1|Ba|C|193
6Z1P|1|Ba|A|194
6Z1P|1|Ba|G|195
6Z1P|1|Ba|U|196
6Z1P|1|Ba|A|197
Current chains
- Chain Ba
- SSU rRNA_1
Nearby chains
- Chain BL
- SelR domain protein
- Chain BY
- mS93
- Chain Bb
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: