HL_6Z1P_066
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UUAGAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6Z1P_066 not in the Motif Atlas
- Homologous match to HL_6CZR_078
- Geometric discrepancy: 0.193
- The information below is about HL_6CZR_078
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
6Z1P|1|Bb|U|321
6Z1P|1|Bb|U|322
6Z1P|1|Bb|A|323
6Z1P|1|Bb|G|324
6Z1P|1|Bb|A|325
6Z1P|1|Bb|G|326
Current chains
- Chain Bb
- SSU rRNA_2
Nearby chains
- Chain Ba
- SSU rRNA_1
- Chain Be
- Ymf76
- Chain Bf
- 30S ribosomal protein S5
- Chain Bo
- 30S ribosomal protein S15
- Chain Bp
- 30S ribosomal protein S16
- Chain Bq
- 30S ribosomal protein S17
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