HL_6Z1P_100
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AAUAAAAUAAAUUUUAAU
- Length
- 18 nucleotides
- Bulged bases
- 6Z1P|1|Ab|A|1898, 6Z1P|1|Ab|A|1900, 6Z1P|1|Ab|A|1907, 6Z1P|1|Ab|U|1908, 6Z1P|1|Ab|U|1909, 6Z1P|1|Ab|U|1910, 6Z1P|1|Ab|U|1911, 6Z1P|1|Ab|A|1912
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Z1P|1|Ab|A|1897
6Z1P|1|Ab|A|1898
6Z1P|1|Ab|U|1899
6Z1P|1|Ab|A|1900
6Z1P|1|Ab|A|1901
6Z1P|1|Ab|A|1902
6Z1P|1|Ab|A|1903
6Z1P|1|Ab|U|1904
6Z1P|1|Ab|A|1905
6Z1P|1|Ab|A|1906
6Z1P|1|Ab|A|1907
6Z1P|1|Ab|U|1908
6Z1P|1|Ab|U|1909
6Z1P|1|Ab|U|1910
6Z1P|1|Ab|U|1911
6Z1P|1|Ab|A|1912
6Z1P|1|Ab|A|1913
6Z1P|1|Ab|U|1914
Current chains
- Chain Ab
- LSU rRNA_2
Nearby chains
- Chain AB
- Ribosomal protein L28
- Chain AP
- mL101
- Chain Ac
- Ribosomal protein L2
Coloring options: