HL_6Z1P_104

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUACUUAAAUAGACG

Length

15 nucleotides

Bulged bases

6Z1P|1|Ba|U|175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z1P|1|Ba|C|166
6Z1P|1|Ba|U|167
6Z1P|1|Ba|A|168
6Z1P|1|Ba|C|169
6Z1P|1|Ba|U|170
6Z1P|1|Ba|U|171
6Z1P|1|Ba|A|172
6Z1P|1|Ba|A|173
6Z1P|1|Ba|A|174
6Z1P|1|Ba|U|175
6Z1P|1|Ba|A|176
6Z1P|1|Ba|G|177
6Z1P|1|Ba|A|178
6Z1P|1|Ba|C|179
6Z1P|1|Ba|G|180

Current chains

Chain Ba

SSU rRNA_1

Nearby chains

Chain Ad

50S ribosomal protein L3

Chain BV

mS90

Chain BY

mS93

Chain Bb

Small subunit ribosomal RNA; SSU rRNA

Chain Bz

mS34