3D structure

PDB id
6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the mitochondrial ribosome from Tetrahymena thermophila
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
UAAUAUUA
Length
8 nucleotides
Bulged bases
6Z1P|1|Bb|A|282
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6Z1P|1|Bb|U|278
6Z1P|1|Bb|A|279
6Z1P|1|Bb|A|280
6Z1P|1|Bb|U|281
6Z1P|1|Bb|A|282
6Z1P|1|Bb|U|283
6Z1P|1|Bb|U|284
6Z1P|1|Bb|A|285

Current chains

Chain Bb
SSU rRNA_2

Nearby chains

Chain BL
SelR domain protein

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0721 s