HL_6Z1P_106
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AAUCUAUU
- Length
- 8 nucleotides
- Bulged bases
- 6Z1P|1|Bb|U|1166, 6Z1P|1|Bb|C|1167, 6Z1P|1|Bb|U|1168, 6Z1P|1|Bb|U|1170
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6Z1P_106 not in the Motif Atlas
- Geometric match to HL_4OOG_001
- Geometric discrepancy: 0.1813
- The information below is about HL_4OOG_001
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_12626.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 17
Unit IDs
6Z1P|1|Bb|A|1164
6Z1P|1|Bb|A|1165
6Z1P|1|Bb|U|1166
6Z1P|1|Bb|C|1167
6Z1P|1|Bb|U|1168
6Z1P|1|Bb|A|1169
6Z1P|1|Bb|U|1170
6Z1P|1|Bb|U|1171
Current chains
- Chain Bb
- SSU rRNA_2
Nearby chains
- Chain BG
- mS76
- Chain BK
- mS79
- Chain Bc
- Ymf73
- Chain Bi
- Ribosomal protein S9
- Chain Br
- Ribosomal protein S18
- Chain Bt
- bS21m
- Chain Bu
- mS23
- Chain Bw
- Ribosomal death-associated protein
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