HL_6Z1P_107

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUUUAUGAAAUUCUAAAA

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z1P|1|Bb|U|1321
6Z1P|1|Bb|U|1322
6Z1P|1|Bb|U|1323
6Z1P|1|Bb|U|1324
6Z1P|1|Bb|A|1325
6Z1P|1|Bb|U|1326
6Z1P|1|Bb|G|1327
6Z1P|1|Bb|A|1328
6Z1P|1|Bb|A|1329
6Z1P|1|Bb|A|1330
6Z1P|1|Bb|U|1331
6Z1P|1|Bb|U|1332
6Z1P|1|Bb|C|1333
6Z1P|1|Bb|U|1334
6Z1P|1|Bb|A|1335
6Z1P|1|Bb|A|1336
6Z1P|1|Bb|A|1337
6Z1P|1|Bb|A|1338

Current chains

Chain Bb

SSU rRNA_2

Nearby chains

Chain BF

mS75

Chain Bm

Ribosomal protein S13

Chain Bn

Ribosomal protein S14

Chain Bs

Ribosomal protein S19

Chain Bx

mS31

Chain By

mS33