HL_6Z6L_017

3D structure

PDB id

6Z6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human CCDC124 bound to 80S ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGACUGUCCCCAGUGC

Length

16 nucleotides

Bulged bases

6Z6L|1|L5|G|1178, 6Z6L|1|L5|U|1179

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z6L|1|L5|G|1173
6Z6L|1|L5|G|1174
6Z6L|1|L5|A|1175
6Z6L|1|L5|C|1176
6Z6L|1|L5|U|1177
6Z6L|1|L5|G|1178
6Z6L|1|L5|U|1179
6Z6L|1|L5|C|1180
6Z6L|1|L5|C|1181
6Z6L|1|L5|C|1182
6Z6L|1|L5|C|1183
6Z6L|1|L5|A|1184
6Z6L|1|L5|G|1185
6Z6L|1|L5|U|1186
6Z6L|1|L5|G|1187
6Z6L|1|L5|C|1188

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L7

5S ribosomal RNA; 5S rRNA

Chain LD

60S ribosomal protein L5

Chain LI

60S ribosomal protein L10-like