HL_6Z6L_034

3D structure

PDB id

6Z6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human CCDC124 bound to 80S ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGGCCGG

Length

7 nucleotides

Bulged bases

6Z6L|1|L5|C|2250

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6Z6L_034 not in the Motif Atlas

Geometric match to HL_7RQB_011

Geometric discrepancy: 0.3564

The information below is about HL_7RQB_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70546.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

6Z6L|1|L5|C|2110
6Z6L|1|L5|G|2111
6Z6L|1|L5|G|2112
6Z6L|1|L5|C|2249
6Z6L|1|L5|C|2250
6Z6L|1|L5|G|2251
6Z6L|1|L5|G|2252

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6