HL_6Z6L_061

3D structure

PDB id

6Z6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human CCDC124 bound to 80S ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

6Z6L|1|L5|G|4195

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6Z6L_061 not in the Motif Atlas

Homologous match to HL_8C3A_055

Geometric discrepancy: 0.1003

The information below is about HL_8C3A_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47383.2

Basepair signature

cWW-F-F-cWW-F-F

Number of instances in this motif group

11

Unit IDs

6Z6L|1|L5|C|4193
6Z6L|1|L5|U|4194
6Z6L|1|L5|G|4195
6Z6L|1|L5|G|4196
6Z6L|1|L5|G|4197
6Z6L|1|L5|G|4198
6Z6L|1|L5|C|4199
6Z6L|1|L5|G|4200
6Z6L|1|L5|G|4201

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LI

60S ribosomal protein L10-like

Chain Lb

60S ribosomal protein L29