HL_6Z6M_062

3D structure

PDB id

6Z6M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AGCCCCGAGGGGCU

Length

14 nucleotides

Bulged bases

6Z6M|1|L5|G|4099

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z6M|1|L5|A|4098
6Z6M|1|L5|G|4099
6Z6M|1|L5|C|4100
6Z6M|1|L5|C|4101
6Z6M|1|L5|C|4102
6Z6M|1|L5|C|4103
6Z6M|1|L5|G|4104
6Z6M|1|L5|A|4105
6Z6M|1|L5|G|4106
6Z6M|1|L5|G|4107
6Z6M|1|L5|G|4108
6Z6M|1|L5|G|4109
6Z6M|1|L5|C|4110
6Z6M|1|L5|U|4111

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LG

60S ribosomal protein L7a

Chain Lg

60S ribosomal protein L34

Chain SB

40S ribosomal protein S3a