HL_6ZJ3_024
3D structure
- PDB id
- 6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.15 Å
Loop
- Sequence
- GGUGAAAG(OMG)(OMC)C
- Length
- 11 nucleotides
- Bulged bases
- 6ZJ3|1|LE|A|1213, 6ZJ3|1|LE|G|1216
- QA status
- Modified nucleotides: OMG, OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZJ3|1|LE|G|1209
6ZJ3|1|LE|G|1210
6ZJ3|1|LE|U|1211
6ZJ3|1|LE|G|1212
6ZJ3|1|LE|A|1213
6ZJ3|1|LE|A|1214
6ZJ3|1|LE|A|1215
6ZJ3|1|LE|G|1216
6ZJ3|1|LE|OMG|1217
6ZJ3|1|LE|OMC|1218
6ZJ3|1|LE|C|1219
Current chains
- Chain LE
- LSU rRNA chain 4
Nearby chains
- Chain LC
- Large subunit ribosomal RNA; LSU rRNA
- Chain LH
- Large subunit ribosomal RNA; LSU rRNA
- Chain LI
- Large subunit ribosomal RNA; LSU rRNA
- Chain LP
- Ribosomal protein uL2
- Chain Lb
- Ribosomal protein eL15
- Chain Ly
- Ribosomal protein eL37
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