HL_6ZJ3_030
3D structure
- PDB id
- 6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.15 Å
Loop
- Sequence
- UGGCAGCCAAGGC(A2M)GAG
- Length
- 17 nucleotides
- Bulged bases
- 6ZJ3|1|LF|C|1728, 6ZJ3|1|LF|G|1739
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZJ3|1|LF|U|1725
6ZJ3|1|LF|G|1726
6ZJ3|1|LF|G|1727
6ZJ3|1|LF|C|1728
6ZJ3|1|LF|A|1729
6ZJ3|1|LF|G|1730
6ZJ3|1|LF|C|1731
6ZJ3|1|LF|C|1732
6ZJ3|1|LF|A|1733
6ZJ3|1|LF|A|1734
6ZJ3|1|LF|G|1735
6ZJ3|1|LF|G|1736
6ZJ3|1|LF|C|1737
6ZJ3|1|LF|A2M|1738
6ZJ3|1|LF|G|1739
6ZJ3|1|LF|A|1740
6ZJ3|1|LF|G|1741
Current chains
- Chain LF
- LSU rRNA chain 5
Nearby chains
- Chain LE
- Large subunit ribosomal RNA; LSU rRNA
- Chain LR
- Ribosomal protein uL4
- Chain LU
- Ribosomal protein eL6
- Chain La
- Ribosomal protein uL15
- Chain Le
- Ribosomal protein eL18
- Chain Lo
- Ribosomal protein eLEgr1
- Chain Lu
- Ribosomal protein eL32
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