HL_6ZJ3_035
3D structure
- PDB id
- 6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.15 Å
Loop
- Sequence
- GAGCA(A2M)GAUUC
- Length
- 11 nucleotides
- Bulged bases
- 6ZJ3|1|LG|A|2021, 6ZJ3|1|LG|U|2025, 6ZJ3|1|LG|U|2026
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZJ3|1|LG|G|2017
6ZJ3|1|LG|A|2018
6ZJ3|1|LG|G|2019
6ZJ3|1|LG|C|2020
6ZJ3|1|LG|A|2021
6ZJ3|1|LG|A2M|2022
6ZJ3|1|LG|G|2023
6ZJ3|1|LG|A|2024
6ZJ3|1|LG|U|2025
6ZJ3|1|LG|U|2026
6ZJ3|1|LG|C|2027
Current chains
- Chain LG
- LSU rRNA chain 6
Nearby chains
- Chain L1
- Ribosomal protein eL39
- Chain LF
- Large subunit ribosomal RNA; LSU rRNA
- Chain LH
- Large subunit ribosomal RNA; LSU rRNA
- Chain Lf
- Ribosomal protein eL19
- Chain Lk
- Ribosomal protein uL23
- Chain Lw
- Ribosomal protein eL34
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