HL_6ZJ3_037

3D structure

PDB id

6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

AGU(PSU)CUCGU(PSU)U

Length

11 nucleotides

Bulged bases

6ZJ3|1|LG|U|2124

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZJ3|1|LG|A|2116
6ZJ3|1|LG|G|2117
6ZJ3|1|LG|U|2118
6ZJ3|1|LG|PSU|2119
6ZJ3|1|LG|C|2120
6ZJ3|1|LG|U|2121
6ZJ3|1|LG|C|2122
6ZJ3|1|LG|G|2123
6ZJ3|1|LG|U|2124
6ZJ3|1|LG|PSU|2125
6ZJ3|1|LG|U|2126

Current chains

Chain LG

LSU rRNA chain 6

Nearby chains

Chain LJ

Large subunit ribosomal RNA; LSU rRNA

Chain LM

LSU rRNA chain 12

Chain Lf

Ribosomal protein eL19

Chain Lj

Ribosomal protein eL22