HL_6ZJ3_051

3D structure

PDB id

6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

GCCA(PSU)GCUUUC

Length

11 nucleotides

Bulged bases

6ZJ3|1|LI|C|3039

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZJ3|1|LI|G|3038
6ZJ3|1|LI|C|3039
6ZJ3|1|LI|C|3040
6ZJ3|1|LI|A|3041
6ZJ3|1|LI|PSU|3042
6ZJ3|1|LI|G|3078
6ZJ3|1|LI|C|3079
6ZJ3|1|LI|U|3080
6ZJ3|1|LI|U|3081
6ZJ3|1|LI|U|3082
6ZJ3|1|LI|C|3083

Current chains

Chain LI

LSU rRNA chain 8

Nearby chains

Chain LV

60S ribosomal protein L7a

Chain SA

Ribosomal protein eS1