HL_6ZJ3_094

3D structure

PDB id

6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

CAUUGGAGUUGUGCUGGCCUUGGGG

Length

25 nucleotides

Bulged bases

6ZJ3|1|S1|A|1112

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZJ3|1|S1|C|1111
6ZJ3|1|S1|A|1112
6ZJ3|1|S1|U|1113
6ZJ3|1|S1|U|1114
6ZJ3|1|S1|G|1115
6ZJ3|1|S1|G|1116
6ZJ3|1|S1|A|1117
6ZJ3|1|S1|G|1118
6ZJ3|1|S1|U|1119
6ZJ3|1|S1|U|1120
6ZJ3|1|S1|G|1121
6ZJ3|1|S1|U|1122
6ZJ3|1|S1|G|1123
6ZJ3|1|S1|C|1124
6ZJ3|1|S1|U|1125
6ZJ3|1|S1|G|1126
6ZJ3|1|S1|G|1127
6ZJ3|1|S1|C|1128
6ZJ3|1|S1|C|1129
6ZJ3|1|S1|U|1130
6ZJ3|1|S1|U|1131
6ZJ3|1|S1|G|1132
6ZJ3|1|S1|G|1133
6ZJ3|1|S1|G|1134
6ZJ3|1|S1|G|1135

Current chains

Chain S1

18S rRNA

Nearby chains

Chain SK

Ribosomal protein eS8

Chain SU

Ribosomal protein uS17

Chain Sg

Ribosomal protein eSEug1