HL_6ZJ3_099

3D structure

PDB id

6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

GCAAGAAUCCUAGAC

Length

15 nucleotides

Bulged bases

6ZJ3|1|S1|C|1452, 6ZJ3|1|S1|G|1463

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZJ3|1|S1|G|1451
6ZJ3|1|S1|C|1452
6ZJ3|1|S1|A|1453
6ZJ3|1|S1|A|1454
6ZJ3|1|S1|G|1455
6ZJ3|1|S1|A|1456
6ZJ3|1|S1|A|1457
6ZJ3|1|S1|U|1458
6ZJ3|1|S1|C|1459
6ZJ3|1|S1|C|1460
6ZJ3|1|S1|U|1461
6ZJ3|1|S1|A|1462
6ZJ3|1|S1|G|1463
6ZJ3|1|S1|A|1464
6ZJ3|1|S1|C|1465

Current chains

Chain S1

18S rRNA

Nearby chains

Chain SA

Ribosomal protein eS1

Chain SB

Ribosomal protein uS2

Chain SV

Ribosomal protein eS17

Chain Sc

Ribosomal protein eS27