HL_6ZME_029
3D structure
- PDB id
- 6ZME (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUGGGGCCGAAACGAUCUCA
- Length
- 20 nucleotides
- Bulged bases
- 6ZME|1|L5|U|1757, 6ZME|1|L5|A|1767
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZME|1|L5|U|1756
6ZME|1|L5|U|1757
6ZME|1|L5|G|1758
6ZME|1|L5|G|1759
6ZME|1|L5|G|1760
6ZME|1|L5|G|1761
6ZME|1|L5|C|1762
6ZME|1|L5|C|1763
6ZME|1|L5|G|1764
6ZME|1|L5|A|1765
6ZME|1|L5|A|1766
6ZME|1|L5|A|1767
6ZME|1|L5|C|1768
6ZME|1|L5|G|1769
6ZME|1|L5|A|1770
6ZME|1|L5|U|1771
6ZME|1|L5|C|1772
6ZME|1|L5|U|1773
6ZME|1|L5|C|1774
6ZME|1|L5|A|1775
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain CE
- Coiled-coil domain-containing protein 124
- Chain CH
- Eukaryotic peptide chain release factor subunit 1
- Chain LD
- 60S ribosomal protein L5
- Chain LI
- 60S ribosomal protein L10-like
- Chain LJ
- 60S ribosomal protein L11
- Chain SP
- 40S ribosomal protein S15
Coloring options: