HL_6ZMI_060
3D structure
- PDB id
- 6ZMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- AGCCCCGAGGGGCU
- Length
- 14 nucleotides
- Bulged bases
- 6ZMI|1|L5|G|4099
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZMI|1|L5|A|4098
6ZMI|1|L5|G|4099
6ZMI|1|L5|C|4100
6ZMI|1|L5|C|4101
6ZMI|1|L5|C|4102
6ZMI|1|L5|C|4103
6ZMI|1|L5|G|4104
6ZMI|1|L5|A|4105
6ZMI|1|L5|G|4106
6ZMI|1|L5|G|4107
6ZMI|1|L5|G|4108
6ZMI|1|L5|G|4109
6ZMI|1|L5|C|4110
6ZMI|1|L5|U|4111
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LG
- 60S ribosomal protein L7a
- Chain Lg
- 60S ribosomal protein L34
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