HL_6ZMO_055

3D structure

PDB id

6ZMO (explore in PDB, NAKB, or RNA 3D Hub)

Description

SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGUCGC

Length

6 nucleotides

Bulged bases

6ZMO|1|L5|G|2907, 6ZMO|1|L5|G|2910

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZMO|1|L5|G|2906
6ZMO|1|L5|G|2907
6ZMO|1|L5|U|2908
6ZMO|1|L5|C|2909
6ZMO|1|L5|G|2910
6ZMO|1|L5|C|3584

Current chains

Chain L5

28S ribosomal RNA

Nearby chains