HL_6ZMW_018

3D structure

PDB id

6ZMW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human 48S translational initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CCCGAGCCG

Length

9 nucleotides

Bulged bases

6ZMW|1|A|G|836, 6ZMW|1|A|G|838, 6ZMW|1|A|C|840

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZMW|1|A|C|833
6ZMW|1|A|C|834
6ZMW|1|A|C|835
6ZMW|1|A|G|836
6ZMW|1|A|A|837
6ZMW|1|A|G|838
6ZMW|1|A|C|839
6ZMW|1|A|C|840
6ZMW|1|A|G|841

Current chains

Chain A

18S rRNA

Nearby chains

Chain 1

Eukaryotic translation initiation factor 3 subunit B

Chain C

40S ribosomal protein S4, X isoform

Chain T

40S ribosomal protein S24