HL_6ZMW_035

3D structure

PDB id

6ZMW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human 48S translational initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CCCCGCCGGGGGCCCUGGCGGAGCG

Length

25 nucleotides

Bulged bases

6ZMW|1|A|C|1753, 6ZMW|1|A|C|1774, 6ZMW|1|A|C|1783

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZMW|1|A|C|1750
6ZMW|1|A|C|1751
6ZMW|1|A|C|1752
6ZMW|1|A|C|1753
6ZMW|1|A|G|1754
6ZMW|1|A|C|1755
6ZMW|1|A|C|1756
6ZMW|1|A|G|1757
6ZMW|1|A|G|1758
6ZMW|1|A|G|1759
6ZMW|1|A|G|1760
6ZMW|1|A|G|1771
6ZMW|1|A|C|1772
6ZMW|1|A|C|1773
6ZMW|1|A|C|1774
6ZMW|1|A|U|1775
6ZMW|1|A|G|1776
6ZMW|1|A|G|1777
6ZMW|1|A|C|1778
6ZMW|1|A|G|1779
6ZMW|1|A|G|1780
6ZMW|1|A|A|1781
6ZMW|1|A|G|1782
6ZMW|1|A|C|1783
6ZMW|1|A|G|1784

Current chains

Chain A

18S rRNA

Nearby chains

Chain S

40S ribosomal protein S6