HL_6ZQC_038

3D structure

PDB id

6ZQC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Pre-A1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

AUCCUUAGCGGU

Length

12 nucleotides

Bulged bases

6ZQC|1|D4|U|156

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZQC|1|D4|A|151
6ZQC|1|D4|U|152
6ZQC|1|D4|C|153
6ZQC|1|D4|C|154
6ZQC|1|D4|U|155
6ZQC|1|D4|U|156
6ZQC|1|D4|A|157
6ZQC|1|D4|G|158
6ZQC|1|D4|C|159
6ZQC|1|D4|G|160
6ZQC|1|D4|G|161
6ZQC|1|D4|U|162

Current chains

Chain D4

U3 snoRNA

Nearby chains

Chain UJ

U3 small nucleolar RNA-associated protein 10