HL_6ZS9_014

3D structure

PDB id

6ZS9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with ribosome recycling factor

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UGAUGAA

Length

7 nucleotides

Bulged bases

6ZS9|1|AA|A|1283, 6ZS9|1|AA|U|1284

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZS9_014 not in the Motif Atlas

Geometric match to HL_7RQB_011

Geometric discrepancy: 0.1723

The information below is about HL_7RQB_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70546.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

6ZS9|1|AA|U|1281
6ZS9|1|AA|G|1282
6ZS9|1|AA|A|1283
6ZS9|1|AA|U|1284
6ZS9|1|AA|G|1285
6ZS9|1|AA|A|1286
6ZS9|1|AA|A|1287

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AB

28S ribosomal protein S2, mitochondrial

Chain AD

28S ribosomal protein S5, mitochondrial

Chain AE

28S ribosomal protein S6, mitochondrial

Chain AS

28S ribosomal protein S23, mitochondrial