HL_6ZSA_012

3D structure

PDB id

6ZSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CCACAG

Length

6 nucleotides

Bulged bases

6ZSA|1|AA|C|1151, 6ZSA|1|AA|A|1154

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSA_012 not in the Motif Atlas

Geometric match to HL_4V9F_003

Geometric discrepancy: 0.2511

The information below is about HL_4V9F_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

6ZSA|1|AA|C|1150
6ZSA|1|AA|C|1151
6ZSA|1|AA|A|1152
6ZSA|1|AA|C|1153
6ZSA|1|AA|A|1154
6ZSA|1|AA|G|1155

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A3

Aurora kinase A-interacting protein

Chain AL

28S ribosomal protein S15, mitochondrial

Chain XA

Large subunit ribosomal RNA; LSU rRNA